Data for the article "A Deep Dive into the Delta Wave: Forecasting SARS-CoV-2 Epidemic Dynamic in Poland with the pDyn Agent-Based Model"

Here we present data used in publication "A Deep Dive into the Delta Wave: Forecasting SARS-CoV-2 Epidemic Dynamic in Poland with the pDyn Agent-Based Model". We used data from various sources: Polish Ministry of Health (1), Eurostat (2), GISAID (ECDC used as proxy accessing the data)(3), Polish National Institute of Public Health(4). Additionaly, data set contains results from Agent-Based simulation.

sim_zgony_woj.tab - Simulated number of deaths in voivodeships. Figure no. 7.

sim_zgony_pl.tab - Number of simulated deaths in Poland. Figure no. 5.

sim_wykr_woj.tab - Simulated registered cases in voivodeships. Figure no. 7.

sim_wykr_pl.tab - Simulated registered cases in Poland. Figure no. 5.

sim_variants.tab - Simulated number of cases of variants. Figure no. 2a.

sim_oiom_woj.tab - Simulated number of people in ICU in voivodeships. Figure no. 7.

sim_oiom_pl.tab - Simulated number of people in ICU. Figure no. 5.

sim_hosp_woj.tab - Simulated number of hospitalized people in voivodeships. Figure no. 7.

sim_hosp_pl.tab - Simulated number of hospitalized people. Figure no. 5.

real_zgony_woj.tab - Number of deaths in voivodeships. Figure no. 7. Source 1.

real_zgony_pl.tab - Number of registered deaths in Poland averaged over 7 day window. Figure no. 5. Source 1.

real_zgony_excess_pl.tab - Estimated excess deaths from Eurostat. Figure no. 5. Source 2.

real_wykr_woj.tab - Number of registered cases in voivodeships averaged over 7 day window. Figure no. 7. Source 1.

real_wykr_pl.tab - Number of registered cases in Poland averaged over 7 day window. Figure no. 5. Source 1.

real_oiom_woj.tab - Number of people in ICU in voivodeships. Figure no. 7.  Source 1.

real_oiom_pl.tab - Number of people in ICU. Figure no. 5. Source 1.

real_hosp_woj.tab - Number of hospitalized people in voivodeships. Figure no. 7. Source 1.

real_hosp_pl.tab - Number of hospitalized people in Poland. Figure no. 5. Source 1.

obserco.tab - OBSER-CO study results. Figure no. 3. Source 4.

immun.tab - Simulated number of recovered, vaccinated, 'recov. or vaccin.'. Figure no. 3.

gisaid_samples.tab - Number of samples of variants. Figure no. 2c. Source 3.

real_nowe_zaszcz.tab - Fraction of vaccinated cases among all registered cases averaged over 31 day window. Figure no. 4. Source 1.

sim_nowe_zaszcz.tab - Fraction of vaccinated cases among all simulated cases averaged over 31 day window. Figure no. 4.

sim_fraction_variants.tab - Simulated prevalence of variants (in %). Figure no. 2b.

gisaid.tab - Dashed lines "ECDC data" in Figure no. 2b. Data on prevalence of variants.